Tisch comp-genomics.org
WebSingle Cell Hub (TISCH, http://tisch.comp-genomics. org), a large-scale curated database that integrates single-cell transcriptomic profiles of nearly 2 million cells from 76 high … http://tisch.comp-genomics.org/data/SKCM_GSE123139
Tisch comp-genomics.org
Did you know?
WebscAPAdb provides a comprehensive and manually curated atlas of poly(A) sites, APA events and poly(A) signals at the single-cell level in six species based on a large volume of … WebMar 7, 2024 · TISCH is a scRNA-seq database focused on the tumor microenvironment (TME). TISCH provides detailed at the single cell level annotation of cell types, allowing one to explore TME in different cancer types . In this dataset, there are three main cell types, including immune cells, stromal cells, and malignant cells.
WebNov 2, 2024 · TISCH2: expanded datasets and new tools for single-cell transcriptome analyses of the tumor microenvironment Nucleic Acids Research Oxford Academic Abstract. The Tumor Immune Single Cell Hub 2 (TISCH2) is a resource of single-cell RNA-seq (scRNA-seq) data from human and mouse tumors, which enables comprehen Skip to … WebAug 15, 2024 · TISCH provides interactive gene expression visualization across multiple datasets at the single-cell level or cluster level, allowing systematic comparison between different cell-types, patients, tissue origins, treatment and response groups, and even different cancer-types.
http://tisch1.comp-genomics.org/documentation/ WebAug 29, 2024 · Compared to other existing tools, such as TCIA, TIDE, and TISCH, TIGER has several advantages. First, TIGER is the first webserver to integrate bulk and single-cell …
WebTISCH Gene Exploration Search a gene across cancer types. A heatmap and a violin plot will be displayed to show the expression of a given gene in different cell types across selected datasets. We recommend users to choose several specific cancer types rather than all cancer types for a quick response. Gene Cell-type annotation
WebNov 16, 2024 · TISCH provides interactive gene expression visualization across multiple datasets at the single-cell level or cluster level, allowing systematic comparison between different cell-types, patients, tissue origins, treatment and response groups, and even different cancer-types. pasco co whos in jailWebTumor Immune Single-cell Hub (TISCH) is a scRNA-seq database, which aims to characterize tumor microenvironment at single-cell resolution. Data collection and processing We collected tumor-related scRNA-seq studies from human and mouse. Besides datasets of treatment-naive patients, those with samples treated are also included. pasco credit card theftWebTISCH数据库网址：tisch.comp-genomics.org 该数据库的成果已于2024年发表在Nucleic Acids Res上，题目为TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment。 论文详细介绍该数据库的背景，数据处理和操作方法。 芒果在这里做简要的分享和总结。 数据来源明确，主要是GEO … pasco county wild game dinnerWebAug 15, 2024 · TISCH provides interactive gene expression visualization across multiple datasets at the single-cell level or cluster level, allowing systematic comparison between different cell-types, patients,... pasco county ymcaWebMay 28, 2024 · BackgroundCD8+ T cells work as a key effector of adaptive immunity and are closely associated with immune response for killing tumor cells. It is crucial to understand the role of tumor-infiltrating CD8+ T cells in uveal melanoma (UM) to predict the prognosis and response to immunotherapy.Materials and MethodsSingle-cell transcriptomes of UM … tinian dynasty hotel \u0026 casinoWebHere, we present Tumor Immune Single Cell Hub (TISCH, http://tisch.comp-genomics. org), a large-scale curated database that integrates single-cell transcriptomic profiles of nearly 2 million cells from 76 high-quality tumor datasets across 27 cancer types. pasco court searchWebJan 6, 2024 · The Tumor Immune Single Cell Hub 2 (TISCH2) is a resource of single-cell RNA-seq (scRNA-seq) data from human and mouse tumors, which enables … tinian gaming commission